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Scaffolding
0.1
This program can assemble genome scaffolds using the pairing information in paired-end reads.
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#include <vector>#include <cmath>Go to the source code of this file.
Macros | |
| #define | BRANCHING_NUMBER_PRECISION 5 |
Typedefs | |
| typedef std::vector< unsigned > | scaffolding::solv::BranchingVector |
| a branching vector is a vector of numbers corresponding to the "progress" in each branch | |
computation of the branching number of a branching vector using code CC by Joseph, Chuang-Chieh Lin (lincc@cs.ccu.edu.tw or josephcclin@gmail.com)
1.8.10