|
Scaffolding
0.1
This program can assemble genome scaffolds using the pairing information in paired-end reads.
|
|
Scaffolding
0.1
This program can assemble genome scaffolds using the pairing information in paired-end reads.
|
This is the complete list of members for phylo::PhyloNet, including all inherited members.
| add_arc(const InternVertexPair &e) (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
| add_arc(const InternVertex &u, const InternVertex &v) (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
| add_vertex(const InternVertex &parent, const size_t idx=0, const std::string &name="") (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
| add_vertex(const std::list< InternVertex > &parents, const size_t idx=0, const std::string &name="") (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
| Arc typedef (defined in phylo::PhyloNet) | phylo::PhyloNet | |
| delete_vertex(const InternVertex &v) (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
| get_leaves() const (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
| get_name(const InternVertex &v) const (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
| get_network() const (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
| get_parents(const InternVertex &u) const (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
| get_root() const (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
| InEdgeIter typedef (defined in phylo::PhyloNet) | phylo::PhyloNet | |
| InEdgeIterRange typedef (defined in phylo::PhyloNet) | phylo::PhyloNet | |
| InternalNet typedef (defined in phylo::PhyloNet) | phylo::PhyloNet | |
| InternVertex typedef (defined in phylo::PhyloNet) | phylo::PhyloNet | |
| InternVertexList typedef (defined in phylo::PhyloNet) | phylo::PhyloNet | |
| InternVertexPair typedef (defined in phylo::PhyloNet) | phylo::PhyloNet | |
| InternVertexSet typedef (defined in phylo::PhyloNet) | phylo::PhyloNet | |
| make_leaf(const InternVertex &v, const std::string &name) (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
| net (defined in phylo::PhyloNet) | phylo::PhyloNet | |
| num_edges() const (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
| num_vertices() const (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
| OutEdgeIter typedef (defined in phylo::PhyloNet) | phylo::PhyloNet | |
| OutEdgeIterRange typedef (defined in phylo::PhyloNet) | phylo::PhyloNet | |
| root (defined in phylo::PhyloNet) | phylo::PhyloNet | protected |
| set_root(const size_t idx=0) (defined in phylo::PhyloNet) | phylo::PhyloNet | inline |
1.8.10
