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Scaffolding
0.1
This program can assemble genome scaffolds using the pairing information in paired-end reads.
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This is the complete list of members for scaffold::MatrixEntry, including all inherited members.
| append_edge(const EdgeName &e, const size_t _weight=0) (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | inline |
| clear() (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | inline |
| edges (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | protected |
| get_edges() const (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | inline |
| has_no_edges() (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | inline |
| is_undefined() const (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | inline |
| join(const MatrixEntry &ME) (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | inline |
| MatrixEntry(const MatrixEntry &E) (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | inline |
| MatrixEntry(const size_t _weight=SIZE_MAX) (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | inline |
| MatrixEntry(const EdgeName &e, const size_t _weight=SIZE_MAX) (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | inline |
| operator+(const MatrixEntry &ME) const (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | inline |
| operator+=(const MatrixEntry &ME) (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | inline |
| operator=(const MatrixEntry &ME) (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | inline |
| set_undefined() (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry | inline |
| weight (defined in scaffold::MatrixEntry) | scaffold::MatrixEntry |
1.8.10