File List

Here is a list of all documented files with brief descriptions:

[detail level 12]

▼ io
read_adj_list.hpp
read_dimacs_graph.hpp
read_dot.hpp
read_fasta.hpp
read_phytree.hpp
scaffold_io.hpp
write_adj_list.hpp
write_dimacs_graph.hpp
write_dot.hpp
write_fasta.hpp
▼ preprocess
jump_preprocess.hpp
negative_length.hpp
pp_pendant_match.hpp
rp_contig_jumps.hpp
▼ solv
branching.hpp
degree_branching.hpp
dp_solution.hpp
dp_table.hpp
FES_branching.hpp
ilp_common.hpp
ilp_contig_jumps.hpp
ilp_model_multi.hpp
trees.hpp
tw_dp.hpp
▼ utils
adv_edge_iters.hpp
alternating_path.hpp
ambigous_paths.hpp
branching_vector.hpp
command_line.hpp
convert.hpp
exceptions.hpp
filters.hpp
graph_infos.hpp
graph_parameters.hpp
graph_typedefs.hpp
graph_utils.hpp
instance.hpp
low_priority_queue.hpp
min_matrix.hpp
normal_distribution.hpp
permissive_matching.hpp
predicates.hpp
profiling.hpp
scaffold_graph.hpp
scaffolding_typedefs.hpp
scaffolding_utils.hpp
scoring.hpp
set_queue.hpp
solution.hpp
string_utils.hpp
td_subgraph.hpp
unordered_pair.hpp
utils.hpp